BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C09SP1|AL425507
(956 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig537 1832 0.0
3x_Contig1 403 e-112
>3x_Contig537
Length = 3151
Score = 1832 bits (918), Expect = 0.0
Identities = 945/958 (98%), Gaps = 2/958 (0%)
Strand = Plus / Minus
Query: 1 tccattgcaggttatatcttaatggttgaagaaattcttatgtaccgctcgctactcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2763 tccattgcaggttatatcttaatggttgaagaaattcttatgtaccgctcgctactcatc 2704
Query: 61 attcgaatgaataaracacacaacggtgatttgaattcagaatcaaacaattcctccaag 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2703 attcgaatgaataaaacacacaacggtgatttgaattcagaatcaaacaattcctccaag 2644
Query: 121 ttacacaatgagacacttatttgactggtcgggattccaattttcgcccgtkgattcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2643 ttacacaatgagacacttatttgactggtcgggattccaattttcgcccgttgattcagc 2584
Query: 181 aattgattatcccttaaracaactgtctgcaagcaaaccaacacaatactagaacctagc 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2583 aattgattatcccttaaaacaactgtctgcaagcaaaccaacacaatactagaacctagc 2524
Query: 241 acttgcatcaaatgttcccattgatcccatatcgggcgtttttgaactgaatttcgatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2523 acttgcatcaaatgttcccattgatcccatatcgggcgtttttgaactgaatttcgatac 2464
Query: 301 ttgacgtctttcctatttagtcaatgaraggkctattaarattaaaacttcatctacatt 360
||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||
Sbjct: 2463 ttgacgtctttcctatttagtcaatgaaaggtctattaaaattaaaacttcatctacatt 2404
Query: 361 ataagccgtaaagggaaactgcgctataggacaaacataatatctctaaatgagagtcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2403 ataagccgtaaagggaaactgcgctataggacaaacataatatctctaaatgagagtcca 2344
Query: 421 tcattcaaaaggtagggacgtcttgttaattaagtttaatagagggactacggcaatatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2343 tcattcaaaaggtagggacgtcttgttaattaagtttaatagagggactacggcaatatt 2284
Query: 481 gtgggccaggtattcttcgcattgctacattcttcgaaacgaaatatgtctggttgattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2283 gtgggccaggtattcttcgcattgctacattcttcgaaacgaaatatgtctggttgattg 2224
Query: 541 atgtttggttcgatagccagcgaagatctatagaaggtagaatagggtctaaccttgttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2223 atgtttggttcgatagccagcgaagatctatagaaggtagaatagggtctaaccttgttt 2164
Query: 601 tatgaracgacattgaratcttatattggctaaaaratacatcacgtctgtctgttaatg 660
||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2163 tatgaaacgacattgaaatcttatattggctaaaaaatacatcacgtctgtctgttaatg 2104
Query: 661 aggtttttcatgcactggttctcaggagtttgaatacttgtatagtaatcttgcatgcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2103 aggtttttcatgcactggttctcaggagtttgaatacttgtatagtaatcttgcatgcaa 2044
Query: 721 ttcgttaatccccaacacatgggtaacgtgttcaatgcgtattttaggtttgaacttgaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2043 ttcgttaatccccaacacatgggtaacgtgttcaatgcgtattttaggtttgaacttgaa 1984
Query: 781 actatgacacaacttaactatatgtcattgcctatcagaaatcaagatggaattcgtata 840
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1983 actatgacacaacttaaatatatgtcattgcctatcagaaatcaagatggaattcgtata 1924
Query: 841 aattgctggtagaattcggaactaacttgacacatctgaattaaggacctttacacatct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1923 aattgctggtagaattcggaactaacttgacacatctgaattaaggacctttacacatct 1864
Query: 901 taaattgttggttgtgt-aaccatcaaactgagcattccg-aaaaamacaacaggcgt 956
||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1863 taaattgttggttgtgtaaaccatcaaactgagcattccgaaaaaacacaacaggcgt 1806
>3x_Contig1
Length = 735
Score = 403 bits (202), Expect = e-112
Identities = 205/208 (98%)
Strand = Plus / Plus
Query: 1 tccattgcaggttatatcttaatggttgaagaaattcttatgtaccgctcgctactcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tccattgcaggttatatcttaatggttgaagaaattcttatgtaccgctcgctactcatc 587
Query: 61 attcgaatgaataaracacacaacggtgatttgaattcagaatcaaacaattcctccaag 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 attcgaatgaataaaacacacaacggtgatttgaattcagaatcaaacaattcctccaag 647
Query: 121 ttacacaatgagacacttatttgactggtcgggattccaattttcgcccgtkgattcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 648 ttacacaatgagacacttatttgactggtcgggattccaattttcgcccgttgattcagc 707
Query: 181 aattgattatcccttaaracaactgtct 208
||||||||||||||||| ||||||||||
Sbjct: 708 aattgattatcccttaaaacaactgtct 735
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5630
Number of Sequences: 1807
Number of extensions: 5630
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 2
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)